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Reading n random lines using read_csv in Pandas

schedule Aug 12, 2023
Last updated
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When file contains a header row

Consider the following my_data.txt file:

A,B,C
1,2,3
4,5,6
7,8,9

To read n random lines using read_csv(~) in Pandas.

import random

def get_num_lines(fname):
with open(fname) as f:
for i, _ in enumerate(f):
pass
return i + 1

num_lines = get_num_lines("my_data.txt") - 1

# How many randomn rows do you want?
sample_size = 2
rows_to_skip = random.sample(range(1,num_lines), num_lines-sample_size)

df = pd.read_csv("my_data.txt", skiprows=rows_to_skip)
df
A B C
0 1 2 3
1 7 8 9

Note the following:

  • we first start by fetching the total number of lines in the file. Since we have a header row in our file, we subtract the number by 1. In this case, num_lines=3.

  • we then use random.sample(~) method to randomly get the row numbers to skip.

    • the first argument is the values to randomly select from. In this case, since num_lines=3, random integers between 1 (inclusive) and 3 (inclusive) is chosen. We used range(1,_) because the first line of the file is for column labels, and so we don't want to skip this row. In this case, it turned out that rows_to_skip=[2], which means that the second row is skipped.

    • the second argument is the number of random integers you want.

When file does not contain a header row

Consider the following my_data.txt file:

1,2,3
4,5,6
7,8,9

To read n random lines using read_csv(~):

import random

def get_num_lines(fname):
with open(fname) as f:
for i, _ in enumerate(f):
pass
return i + 1

num_lines = get_num_lines("my_data.txt")

# How many random rows do you want?
sample_size = 2
rows_to_skip = random.sample(range(num_lines), num_lines-sample_size)

df = pd.read_csv("my_data.txt", skiprows=rows_to_skip, header=None)
df
0 1 2
0 4 5 6
1 7 8 9

Note the following:

  • we first start by fetching the total number of lines in the file. In this case, num_lines=3.

  • we then use random.sample(~) method to randomly get the row numbers to skip. In this case, it turns out that rows_to_skip=[0].

robocat
Published by Isshin Inada
Edited by 0 others
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